BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E08SP1|AL426051
(798 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1071 1514 0.0
>3x_Contig1071
Length = 4881
Score = 1514 bits (759), Expect = 0.0
Identities = 785/797 (98%), Gaps = 2/797 (0%)
Strand = Plus / Plus
Query: 2 aaactgatattggtaacttctgaattatcagccggctctctctgccatctatatataaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3112 aaactgatattggtaacttctgaattatcagccggctctctctgccatc-atatataaaa 3170
Query: 62 atatgactgaatttgattgaaaaaggtcttttgtacttacttgaaaatataaactaacag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3171 atatgactgaatttgattgaaaaaggtcttttgtacttacttgaaaatataaactaacag 3230
Query: 122 aaacaaaaatgacgaaatgcaacaaatcaacaattctacttgtaagacttgcatgaaact 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3231 aaacaaaaatgacgaaatgcaacaaatcaacaattctacttgtaagacttgcatgaaact 3290
Query: 182 catgtaacgtatgaggtcctagaataatatatatatvantbtnmvgagaccaaacaccgt 241
||||||||||||||||||| |||||||||||||||| | | | |||||||||||||||
Sbjct: 3291 catgtaacgtatgaggtcc-agaataatatatatataaatttaaagagaccaaacaccgt 3349
Query: 242 tgtgtagtactgcagtttgcatcgtccttattactgcaaaggaaaaaaaaaggtctggta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3350 tgtgtagtactgcagtttgcatcgtccttattactgcaaaggaaaaaaaaaggtctggta 3409
Query: 302 aatggccggctggcagcmatataaaattactttttccgtatttactgggatgaaatacca 361
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3410 aatggccggctggcagcaatataaaattactttttccgtatttactgggatgaaatacca 3469
Query: 362 ggcttcttgtcatgaaatatttgcmtttaatattagtactactggtagtactactggkag 421
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 3470 ggcttcttgtcatgaaatatttgcatttaatattagtactactggtagtactactggtag 3529
Query: 422 tactttcttcagataataattatttaggtgtaatgaaagatgcgctgcagattctaacac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3530 tactttcttcagataataattatttaggtgtaatgaaagatgcgctgcagattctaacac 3589
Query: 482 aagtgctgcctcaatttccaattccttggtgtgcggttttctgtttcgcgattatgccag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3590 aagtgctgcctcaatttccaattccttggtgtgcggttttctgtttcgcgattatgccag 3649
Query: 542 atatggtagagaagcgaatctatgcyacaatcagggcgtaggaaatctggaaaaaaaagg 601
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3650 atatggtagagaagcgaatctatgctacaatcagggcgtaggaaatctggaaaaaaaagg 3709
Query: 602 ttcagagccttagcaacaggaacgtagaaacggcatataacagagtgtgagtgaatgtgc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3710 ttcagagccttagcaacaggaacgtagaaacggcatataacagagtgtgagtgaatgtgc 3769
Query: 662 ctgtaggtgtcctctcatgtgactgacagataaacaggaagccctttgtagtgggggtta 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3770 ctgtaggtgtcctctcatgtgactgacagataaacaggaagccctttgtagtgggggtta 3829
Query: 722 ttggatctgcgtaggtgtacactgtgccaatgttcttttctttggcgatttgaatagcga 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3830 ttggatctgcgtaggtgtacactgtgccaatgttcttttctttggcgatttgaatagcga 3889
Query: 782 taattccggaatagtta 798
|||||||||||||||||
Sbjct: 3890 taattccggaatagtta 3906
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6929
Number of Sequences: 1807
Number of extensions: 6929
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 798
length of database: 10,358,551
effective HSP length: 16
effective length of query: 782
effective length of database: 10,329,639
effective search space: 8077777698
effective search space used: 8077777698
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)